CDS

Accession Number TCMCG017C29966
gbkey CDS
Protein Id OMO63250.1
Location join(65746..67506,69023..69073,70042..70140,70219..70362,70467..70598)
GeneID InterPro:IPR001841
Organism Corchorus olitorius
locus_tag COLO4_32635

Protein

Length 728aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01021138.1
Definition Zinc finger, RING-type [Corchorus olitorius]
Locus_tag COLO4_32635

EGGNOG-MAPPER Annotation

COG_category O
Description E3 ubiquitin-protein ligase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10635        [VIEW IN KEGG]
ko:K19041        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000209        [VIEW IN EMBL-EBI]
GO:0000902        [VIEW IN EMBL-EBI]
GO:0000904        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006928        [VIEW IN EMBL-EBI]
GO:0006935        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007399        [VIEW IN EMBL-EBI]
GO:0007409        [VIEW IN EMBL-EBI]
GO:0007411        [VIEW IN EMBL-EBI]
GO:0007568        [VIEW IN EMBL-EBI]
GO:0008045        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009967        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0010259        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010647        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0021675        [VIEW IN EMBL-EBI]
GO:0022008        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023056        [VIEW IN EMBL-EBI]
GO:0030030        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0030182        [VIEW IN EMBL-EBI]
GO:0030510        [VIEW IN EMBL-EBI]
GO:0030513        [VIEW IN EMBL-EBI]
GO:0031175        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0032990        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0035107        [VIEW IN EMBL-EBI]
GO:0035108        [VIEW IN EMBL-EBI]
GO:0035136        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0040011        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042330        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048666        [VIEW IN EMBL-EBI]
GO:0048667        [VIEW IN EMBL-EBI]
GO:0048699        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048736        [VIEW IN EMBL-EBI]
GO:0048812        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048858        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0060173        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060384        [VIEW IN EMBL-EBI]
GO:0061061        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0061564        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090092        [VIEW IN EMBL-EBI]
GO:0090100        [VIEW IN EMBL-EBI]
GO:0090287        [VIEW IN EMBL-EBI]
GO:0097485        [VIEW IN EMBL-EBI]
GO:0120036        [VIEW IN EMBL-EBI]
GO:0120039        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAAGGTCAGGGGGGCACCATTGATTCCTTTCCTGAAACTGTTAACATTGATGAGGGATCTAGCCCCAACAATAATAGTATCGGCCAACCGAGCTCTTTGCATAGCATGCTGAATCCTGTGGAAACTCGGTTATCTAATTATACTGTATCATCTGGTGGGACAATGCATGGAAATGCTATTACTCCTGATGTTCAGAGCTTTAGTGGCTGGAACTCTGGTGAACCGAGCTCTAGGTTGAGACTTCAAAACCAGGTGATGCAGGATGTCCTAAACCACCATATCAATGATGATGGAACAAAAATGGAGCGTGGTTGGTCTTCTTCTTATGGTGTTCGTGCTGGAGCTGCTTCAAGGTCAGAAGAAAGGCAGATCGAATCACCGAACATCTTCTTTCCTGGGAGGCTGAATAATGGACGGAGTGGCAATCAGGTCAGAAGTGGGCCTGTATATTTGCAAGGTTCCAGCTCTAGTCATATCCCACAGAATATGAATTTAAATGAAGGATTTATTAGCAGCAGCGGTAATGGAGGGTCAAGTGTGGAAACTGGTCTTGGTCCTAGTCTCCGCAACTCAGGTGGAGTAGAAAGAGAGCAAACATCTAATGCCTGTGTTTCTTCTGATAATGTTGGTAGTTCATCTGGAAGCTCGAATTATATGGGGGAGGAACCCAATGATGGTTCTGGTTGTTCTTTGGGCAGTTGGGGTTTATCCTGCAAGAGGAAGGCCCTTGAAGGTACTTCTGGACAGTCTTATTCTGCTAGTACGTCAAGTTGTTTTCAACAAATTGAGAATGCTGCATGGCATATTGGTCCTGCTCGAAATGATGCTTCTAGCAGCTTGAGTTTGTCTACACCCTCTCGGAACTTCCTCAACGTTGGTCCTCCTGATCAGCCAAATCCAAGAGTTGGGCTTGGCATGAGAGGAGTAATTGCTGATGCTTTTCCTTCTTCAAGCGTAAGAAGAGCAAATTCAGGAAACCAACAAGAATCTGTACCATATAGTTTATCATCAACTGGGGTTACAGGGCATTCCAGTTTTAGCTCTCTTAATCAACCTAGAACTGTCCCTTTTAGTGACTCTTTGGACTTGAGATCTACAGCAGCAATAGCTGGAAATTCTAGTTCTGCCCCACCTCAACCTCATATGAGGACTGTTTCTGTTGTGCCAAGAAGTGTGCATCCTTTTCCTTGGAATGGTGCTTCCAATTCAAGAGCTGGCAATCCATCAAGTTCTATTAATTCTGGAGAGAGAGCTGCTGCAATGAGGGAGGAACCAAACATTAGAAATATCCCGAGAAACAATGTAGAGCATCCCATGTTTTCTCCTGCAACTGAGATGAGAAATCTGGCACAAGATCCAACAGGTTGGAGTTTGGCTTCTGGAAGTATTCCATCCTCTAGTAGACCTGGGCCTAGTTCAAGCATCCATCCTTTGCCTACTCCTTCCTGGATTTCTTCTCAGAACCCTTCAATACATAATCAACAAAGACTATCAGAGTTTTCTCCTTGGTCTCTATTTCCACCAATTGATTCTGAACCTGGTGGTCATAGTGGCCATTTCCCTCCATTATCTGCAGCCCCTTCTGCATCCTCGCAAGAGACAGTGATGCCACCTGGATCAAATAGTCAAGGTAACAATCAACCATTCCCAAGGTCAGCATTCTTATTGGAGAGACACGGTGATGATGTTCTTGGAATGCCCCATTCACTGCGAGCTTTGGCTGCTGATATTGAAGGGAGACACCGGCTGATATCTGAGATTCGTCAAGTCTTGAATGCTATGCGTAGAGGGGAGAACTTACGATTTGAGGACCATATGCTGTTTGATCCATTCGTATATCAAGGTATGGCTGAAACACATGACAGACATAGAGATATGCGCCTTGATGTTGATAACATGTCTTATGAGGAATTGTTGGCGTTAGAAGAACAAATAGGAGATGTGAACACTGGACTGAGTGAGGAAACCATCATGAAGTTGATGAAACAGCAGAAATATTCATCTACTACAACAGAATCCCCGCAAGATTTGGAACCTTGCTGTATCTGTCAGGAAGAATATGTGGATGGGGATGATACCGGGGCATTAGATTGTGGACATGACTTCCACATTAACTGCATCAAACAGTGGCTTTTGCTGAAAAACCTATGTCCTATATGTAAGACAACAGCCTTGCTTAAATGA
Protein:  
MQGQGGTIDSFPETVNIDEGSSPNNNSIGQPSSLHSMLNPVETRLSNYTVSSGGTMHGNAITPDVQSFSGWNSGEPSSRLRLQNQVMQDVLNHHINDDGTKMERGWSSSYGVRAGAASRSEERQIESPNIFFPGRLNNGRSGNQVRSGPVYLQGSSSSHIPQNMNLNEGFISSSGNGGSSVETGLGPSLRNSGGVEREQTSNACVSSDNVGSSSGSSNYMGEEPNDGSGCSLGSWGLSCKRKALEGTSGQSYSASTSSCFQQIENAAWHIGPARNDASSSLSLSTPSRNFLNVGPPDQPNPRVGLGMRGVIADAFPSSSVRRANSGNQQESVPYSLSSTGVTGHSSFSSLNQPRTVPFSDSLDLRSTAAIAGNSSSAPPQPHMRTVSVVPRSVHPFPWNGASNSRAGNPSSSINSGERAAAMREEPNIRNIPRNNVEHPMFSPATEMRNLAQDPTGWSLASGSIPSSSRPGPSSSIHPLPTPSWISSQNPSIHNQQRLSEFSPWSLFPPIDSEPGGHSGHFPPLSAAPSASSQETVMPPGSNSQGNNQPFPRSAFLLERHGDDVLGMPHSLRALAADIEGRHRLISEIRQVLNAMRRGENLRFEDHMLFDPFVYQGMAETHDRHRDMRLDVDNMSYEELLALEEQIGDVNTGLSEETIMKLMKQQKYSSTTTESPQDLEPCCICQEEYVDGDDTGALDCGHDFHINCIKQWLLLKNLCPICKTTALLK